The Discovery Bioinformatics Core has a Ph.D.-level statistician (Dr. Constantin Georgescu) to assist with statistical issues, and we also have experience working with next-generation sequencing data (e.g., RNA-seq, CHiP-seq). We have also developed software to identify genomic commonalities when given a set of genomic regions (Dozmorov et al., 2012).
Dozmorov, M.G., Cara, L.R., Giles, C.B., and Wren, J.D. (2013). GenomeRunner: automating genome exploration. Bioinformatics 28, 419-420.